pappso::XicWidget Class Reference

#include <xicwidget.h>

Inheritance diagram for pappso::XicWidget:

Signals
void	rtChanged (double rt) const
	announce the current retention time (under mouse) in seconds
void	xicPeakListChanged (pappso::XicXicPeakPairList xic_peak_list) const
void	clicked (double rt, double intensity) const
	announce mouse position on click (rt in seconds, intensity)
void	operateNewRange (QCPRange new_range)
	get the new Range when its change

Public Member Functions
	XicWidget (QWidget *parent=0)
	~XicWidget ()
QCPGraph *	addXicSp (XicCstSPtr xic_sp)
void	addMsMsEvent (const Xic *xic_p, pappso::pappso_double rt)
void	addXicPeakList (const Xic *xic_p, const std::vector< pappso::TracePeakCstSPtr > &xic_peak_list)
void	setName (const Xic *xic_p, const QString &name)
const QString &	getName (const Xic *xic_p) const
void	clear ()
void	plot ()
void	rescale ()
void	toQPaintDevice (QPaintDevice *device, const QSize &size) override
void	setRetentionTimeInSeconds ()
void	setRetentionTimeInMinutes ()
void	drawXicPeakBorders (pappso::TracePeakCstSPtr xic_peak)
void	clearXicPeakBorders ()
QCPAxis *	getRtAxisP ()
	get the plots axis and rescale one axis with the given range
QCPAxis *	getIntensityAxisP ()
void	rescaleOneRange (QString axis_name, QCPRange new_range)
Public Member Functions inherited from GraphicDeviceWidget
	GraphicDeviceWidget (QWidget *parent)
virtual	~GraphicDeviceWidget ()
virtual void	toSvgFile (const QString &filename, const QString &title, const QString &description, const QSize &size) final

Protected Member Functions
void	rtChangeEvent (pappso::pappso_double rt) const
void	xicClickEvent (pappso::pappso_double rt, pappso::pappso_double intensity) const
void	replotAll ()
XicCstSPtr	getXicCstSPtr (const Xic *xic_p) const

Protected Attributes
bool	_rt_in_seconds = true

Private Attributes
std::map< const Xic *, QString >	_map_xic_name
std::map< const Xic *, pappso::pappso_double >	_map_xic_msms_event
std::vector< XicCstSPtr >	_xic_sp_list
XicXicPeakPairList	_xic_peak_sp_list
QCPXic *	_qcp_xic

Friends
class	QCPXic

Detailed Description

Definition at line 47 of file xicwidget.h.

Constructor & Destructor Documentation

XicWidget()

XicWidget::XicWidget

(

QWidget *

parent = 0

)

Definition at line 41 of file xicwidget.cpp.

                                    : GraphicDeviceWidget(parent)
{
  qDebug() << "XicWidget::XicWidget begin";
 
 
  this->setLayout(new QHBoxLayout(this));
 
  setMinimumSize(200, 160);
  this->layout()->setContentsMargins(0, 0, 0, 0);
 
  _qcp_xic = new QCPXic(this);
  this->layout()->addWidget(_qcp_xic);
  qDebug() << "XicWidget::XicWidget end";
}

References GraphicDeviceWidget::GraphicDeviceWidget(), _qcp_xic, and QCPXic.

~XicWidget()

XicWidget::~XicWidget

(

)

Definition at line 55 of file xicwidget.cpp.

{
}

Member Function Documentation

addMsMsEvent()

void XicWidget::addMsMsEvent	(	const Xic *	xic_p,
		pappso::pappso_double	rt )

Definition at line 60 of file xicwidget.cpp.

{
  XicCstSPtr xic_sp = getXicCstSPtr(xic_p);
  _qcp_xic->addMsMsEvent(xic_p, rt);
  _map_xic_msms_event[xic_p] = rt;
}

References _map_xic_msms_event, _qcp_xic, and getXicCstSPtr().

addXicPeakList()

void XicWidget::addXicPeakList	(	const Xic *	xic_p,
		const std::vector< pappso::TracePeakCstSPtr > &	xic_peak_list )

Definition at line 153 of file xicwidget.cpp.

{
  XicCstSPtr xic_sp = getXicCstSPtr(xic_p);
  _qcp_xic->addXicPeakList(xic_p, xic_peak_list);
  for(const pappso::TracePeakCstSPtr &xic_peak : xic_peak_list)
    {
      _xic_peak_sp_list.push_back(std::pair<XicCstSPtr, TracePeakCstSPtr>(xic_sp, xic_peak));
    }
}

References _qcp_xic, _xic_peak_sp_list, and getXicCstSPtr().

addXicSp()

QCPGraph * XicWidget::addXicSp

(

XicCstSPtr

xic_sp

)

Definition at line 67 of file xicwidget.cpp.

{
  _xic_sp_list.push_back(xic_sp);
  return _qcp_xic->addXicP(xic_sp.get());
}

References _qcp_xic, and _xic_sp_list.

clear()

void XicWidget::clear

(

)

Definition at line 129 of file xicwidget.cpp.

{
  _map_xic_name.clear();
  _xic_sp_list.clear();
  _xic_peak_sp_list.clear();
  _qcp_xic->clear();
  _map_xic_msms_event.clear();
}

References _map_xic_msms_event, _map_xic_name, _qcp_xic, _xic_peak_sp_list, and _xic_sp_list.

clearXicPeakBorders()

void XicWidget::clearXicPeakBorders

(

)

Definition at line 279 of file xicwidget.cpp.

{
  _qcp_xic->clearXicPeakBorders();
}

References _qcp_xic.

clicked

void pappso::XicWidget::clicked ( double rt, double intensity ) const

signal

announce mouse position on click (rt in seconds, intensity)

Referenced by xicClickEvent().

drawXicPeakBorders()

void XicWidget::drawXicPeakBorders

(

pappso::TracePeakCstSPtr

xic_peak

)

Definition at line 249 of file xicwidget.cpp.

{
  XicCstSPtr xic_sp;
  for(std::pair<XicCstSPtr, TracePeakCstSPtr> pair_xic_peak : _xic_peak_sp_list)
    {
      if(pair_xic_peak.second.get() == xic_peak.get())
        {
          xic_sp = pair_xic_peak.first;
          break;
        }
    }
 
  if(xic_sp.get() != nullptr)
    {
 
      unsigned int i = 0;
      for(XicCstSPtr xic_in_list : _xic_sp_list)
        {
          if(xic_in_list.get() == xic_sp.get())
            {
              break;
            }
          i++;
        }
      _qcp_xic->drawXicPeakBorders(i, xic_sp.get(), xic_peak.get());
    }
}

References _qcp_xic, _xic_peak_sp_list, and _xic_sp_list.

getIntensityAxisP()

QCPAxis * XicWidget::getIntensityAxisP

(

)

Definition at line 109 of file xicwidget.cpp.

{
  return _qcp_xic->yAxis;
}

References _qcp_xic.

getName()

const QString & XicWidget::getName

(

const Xic *

xic_p

)

const

Definition at line 74 of file xicwidget.cpp.

{
  XicCstSPtr xic_sp = getXicCstSPtr(xic_p);
  return _map_xic_name.at(xic_p);
}

References _map_xic_name, and getXicCstSPtr().

getRtAxisP()

QCPAxis * XicWidget::getRtAxisP

(

)

get the plots axis and rescale one axis with the given range

Definition at line 103 of file xicwidget.cpp.

{
  return _qcp_xic->xAxis;
}

References _qcp_xic.

getXicCstSPtr()

XicCstSPtr XicWidget::getXicCstSPtr ( const Xic * xic_p ) const

protected

Definition at line 139 of file xicwidget.cpp.

{
  std::vector<XicCstSPtr>::const_iterator it =
    std::find_if(_xic_sp_list.begin(), _xic_sp_list.end(), [xic_p](XicCstSPtr xic_sp) {
      return xic_sp.get() == xic_p;
    });
  if(it == _xic_sp_list.end())
    {
      throw pappso::ExceptionNotFound(tr("ERROR : xic pointer not found"));
    }
  return *it;
}

References _xic_sp_list.

Referenced by addMsMsEvent(), addXicPeakList(), getName(), QCPXic, and setName().

operateNewRange

void pappso::XicWidget::operateNewRange ( QCPRange new_range )

signal

get the new Range when its change

plot()

void XicWidget::plot

(

)

Definition at line 90 of file xicwidget.cpp.

{
  _qcp_xic->replot();
}

References _qcp_xic.

replotAll()

void XicWidget::replotAll ( )

protected

Definition at line 212 of file xicwidget.cpp.

{
  _qcp_xic->clear();
 
  for(XicCstSPtr xic_sp : _xic_sp_list)
    {
      _qcp_xic->addXicP(xic_sp.get());
 
      std::vector<TracePeakCstSPtr> xic_peak_list;
      for(auto xic_map_peak_list : _xic_peak_sp_list)
        {
          if(xic_map_peak_list.first.get() == xic_sp.get())
            xic_peak_list.push_back(xic_map_peak_list.second);
        }
      _qcp_xic->addXicPeakList(xic_sp.get(), xic_peak_list);
    }
  for(auto xic_name : _map_xic_name)
    {
      setName(xic_name.first, xic_name.second);
    }
  for(auto xic_msms : _map_xic_msms_event)
    {
      _qcp_xic->addMsMsEvent(xic_msms.first, xic_msms.second);
    }
 
  rescale();
  _qcp_xic->replot();
}

References _map_xic_msms_event, _map_xic_name, _qcp_xic, _xic_peak_sp_list, _xic_sp_list, rescale(), and setName().

Referenced by QCPXic, setRetentionTimeInMinutes(), and setRetentionTimeInSeconds().

rescale()

void XicWidget::rescale

(

)

Definition at line 95 of file xicwidget.cpp.

{
  _qcp_xic->xAxis->rescale(true);
  _qcp_xic->yAxis->rescale(true);
  _qcp_xic->rescale();
}

References _qcp_xic.

Referenced by replotAll().

rescaleOneRange()

void XicWidget::rescaleOneRange	(	QString	axis_name,
		QCPRange	new_range )

Definition at line 115 of file xicwidget.cpp.

{
  if(axis_name == "xAxis")
    {
      _qcp_xic->xAxis->setRange(new_range);
    }
  else // axis_name == "yAxis"
    {
      _qcp_xic->yAxis->setRange(new_range);
    }
  _qcp_xic->replot();
}

References _qcp_xic.

rtChanged

void pappso::XicWidget::rtChanged ( double rt ) const

signal

announce the current retention time (under mouse) in seconds

Referenced by rtChangeEvent().

rtChangeEvent()

void XicWidget::rtChangeEvent ( pappso::pappso_double rt ) const

protected

Definition at line 164 of file xicwidget.cpp.

{
  emit rtChanged(rt);
 
  std::vector<std::pair<XicCstSPtr, TracePeakCstSPtr>> over_xic_peak_list;
  for(std::pair<XicCstSPtr, TracePeakCstSPtr> pair_xic_peak : _xic_peak_sp_list)
    {
      if(pair_xic_peak.second.get()->containsRt(rt))
        {
          over_xic_peak_list.push_back(pair_xic_peak);
        }
    }
 
  // if (over_xic_peak_list.size() > 0) {
  emit xicPeakListChanged(over_xic_peak_list);
  //}
}

References _xic_peak_sp_list, rtChanged(), and xicPeakListChanged().

Referenced by QCPXic.

setName()

void XicWidget::setName	(	const Xic *	xic_p,
		const QString &	name )

Definition at line 81 of file xicwidget.cpp.

{
  XicCstSPtr xic_sp = getXicCstSPtr(xic_p);
  _qcp_xic->legend->setVisible(true);
  _qcp_xic->setName(xic_p, name);
  _map_xic_name[xic_p] = name;
}

References _map_xic_name, _qcp_xic, and getXicCstSPtr().

Referenced by replotAll().

setRetentionTimeInMinutes()

void XicWidget::setRetentionTimeInMinutes

(

)

Definition at line 204 of file xicwidget.cpp.

{
  _rt_in_seconds = false;
  _qcp_xic->xAxis->setLabel("retention time (min)");
  replotAll();
}

References _qcp_xic, _rt_in_seconds, and replotAll().

setRetentionTimeInSeconds()

void XicWidget::setRetentionTimeInSeconds

(

)

Definition at line 197 of file xicwidget.cpp.

{
  _rt_in_seconds = true;
  _qcp_xic->xAxis->setLabel("retention time (sec)");
  replotAll();
}

References _qcp_xic, _rt_in_seconds, and replotAll().

toQPaintDevice()

void XicWidget::toQPaintDevice ( QPaintDevice * device, const QSize & size )

overridevirtual

Implements GraphicDeviceWidget.

Definition at line 183 of file xicwidget.cpp.

{
 
  if(_qcp_xic != nullptr)
    {
      QCPPainter painter;
      painter.begin(device);
      _qcp_xic->toPainter(&painter, size.width(), size.height());
      painter.end();
    }
}

References _qcp_xic.

xicClickEvent()

void XicWidget::xicClickEvent ( pappso::pappso_double rt, pappso::pappso_double intensity ) const

protected

Definition at line 242 of file xicwidget.cpp.

{
  emit clicked(rt, intensity);
}

References clicked().

Referenced by QCPXic.

xicPeakListChanged

void pappso::XicWidget::xicPeakListChanged ( pappso::XicXicPeakPairList xic_peak_list ) const

signal

Referenced by rtChangeEvent().

Friends And Related Symbol Documentation

QCPXic

friend class QCPXic

friend

Definition at line 89 of file xicwidget.h.

References getXicCstSPtr(), QCPXic, replotAll(), rtChangeEvent(), and xicClickEvent().

Referenced by XicWidget(), and QCPXic.

Member Data Documentation

_map_xic_msms_event

std::map<const Xic *, pappso::pappso_double> pappso::XicWidget::_map_xic_msms_event

private

Definition at line 101 of file xicwidget.h.

Referenced by addMsMsEvent(), clear(), and replotAll().

_map_xic_name

std::map<const Xic *, QString> pappso::XicWidget::_map_xic_name

private

Definition at line 100 of file xicwidget.h.

Referenced by clear(), getName(), replotAll(), and setName().

_qcp_xic

QCPXic* pappso::XicWidget::_qcp_xic

private

Definition at line 104 of file xicwidget.h.

Referenced by XicWidget(), addMsMsEvent(), addXicPeakList(), addXicSp(), clear(), clearXicPeakBorders(), drawXicPeakBorders(), getIntensityAxisP(), getRtAxisP(), plot(), replotAll(), rescale(), rescaleOneRange(), setName(), setRetentionTimeInMinutes(), setRetentionTimeInSeconds(), and toQPaintDevice().

_rt_in_seconds

bool pappso::XicWidget::_rt_in_seconds = true

protected

Definition at line 97 of file xicwidget.h.

Referenced by setRetentionTimeInMinutes(), and setRetentionTimeInSeconds().

_xic_peak_sp_list

XicXicPeakPairList pappso::XicWidget::_xic_peak_sp_list

private

Definition at line 103 of file xicwidget.h.

Referenced by addXicPeakList(), clear(), drawXicPeakBorders(), replotAll(), and rtChangeEvent().

_xic_sp_list

std::vector<XicCstSPtr> pappso::XicWidget::_xic_sp_list

private

Definition at line 102 of file xicwidget.h.

Referenced by addXicSp(), clear(), drawXicPeakBorders(), getXicCstSPtr(), and replotAll().

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The documentation for this class was generated from the following files:

• pappsomspp/gui/xicwidget/xicwidget.h
• pappsomspp/gui/xicwidget/xicwidget.cpp