pappso::PeakIonIsotopeMatch Class Reference

#include <peakionisotopematch.h>

Inheritance diagram for pappso::PeakIonIsotopeMatch:

Public Member Functions
	PeakIonIsotopeMatch (const DataPoint &peak, const PeptideNaturalIsotopeAverageSp &naturalIsotopeAverageSp, const PeptideFragmentIonSp &ion_sp)
	PeakIonIsotopeMatch (const PeakIonIsotopeMatch &other)
	PeakIonIsotopeMatch (PeakIonIsotopeMatch &&other)
virtual	~PeakIonIsotopeMatch ()
virtual const PeptideNaturalIsotopeAverageSp &	getPeptideNaturalIsotopeAverageSp () const
PeakIonIsotopeMatch &	operator= (const PeakIonIsotopeMatch &other)
virtual QString	toString () const
Public Member Functions inherited from pappso::PeakIonMatch
	PeakIonMatch (const DataPoint &peak, const PeptideFragmentIonSp &ion_sp, unsigned int charge)
	PeakIonMatch (const PeakIonMatch &other)
	PeakIonMatch (PeakIonMatch &&other)
virtual	~PeakIonMatch ()
PeakIonMatch &	operator= (const PeakIonMatch &other)
virtual const PeptideFragmentIonSp &	getPeptideFragmentIonSp () const
const DataPoint &	getPeak () const
unsigned int	getCharge () const
Enums::PeptideIon	getPeptideIonType () const
PeptideDirection	getPeptideIonDirection () const

Private Attributes
PeptideNaturalIsotopeAverageSp	_naturalIsotopeAverageSp

Detailed Description

Definition at line 46 of file peakionisotopematch.h.

Constructor & Destructor Documentation

PeakIonIsotopeMatch() [1/3]

pappso::PeakIonIsotopeMatch::PeakIonIsotopeMatch	(	const DataPoint &	peak,
		const PeptideNaturalIsotopeAverageSp &	naturalIsotopeAverageSp,
		const PeptideFragmentIonSp &	ion_sp )

Definition at line 59 of file peakionisotopematch.cpp.

  : PeakIonMatch(peak, ion_sp, naturalIsotopeAverageSp.get()->getCharge()),
    _naturalIsotopeAverageSp(naturalIsotopeAverageSp)
{
  qDebug();
}

References pappso::PeakIonMatch::PeakIonMatch(), _naturalIsotopeAverageSp, and pappso::PeakIonMatch::getCharge().

Referenced by PeakIonIsotopeMatch(), PeakIonIsotopeMatch(), and operator=().

PeakIonIsotopeMatch() [2/3]

pappso::PeakIonIsotopeMatch::PeakIonIsotopeMatch

(

const PeakIonIsotopeMatch &

other

)

Definition at line 69 of file peakionisotopematch.cpp.

                                                                         : PeakIonMatch(other)
{
  _naturalIsotopeAverageSp = other._naturalIsotopeAverageSp;
}

References PeakIonIsotopeMatch(), pappso::PeakIonMatch::PeakIonMatch(), and _naturalIsotopeAverageSp.

PeakIonIsotopeMatch() [3/3]

pappso::PeakIonIsotopeMatch::PeakIonIsotopeMatch

(

PeakIonIsotopeMatch &&

other

)

Definition at line 75 of file peakionisotopematch.cpp.

  : PeakIonMatch(std::move(other))
{
  _naturalIsotopeAverageSp = other._naturalIsotopeAverageSp;
}

References PeakIonIsotopeMatch(), pappso::PeakIonMatch::PeakIonMatch(), and _naturalIsotopeAverageSp.

~PeakIonIsotopeMatch()

pappso::PeakIonIsotopeMatch::~PeakIonIsotopeMatch ( )

virtual

Definition at line 81 of file peakionisotopematch.cpp.

{
}

Member Function Documentation

getPeptideNaturalIsotopeAverageSp()

const PeptideNaturalIsotopeAverageSp & pappso::PeakIonIsotopeMatch::getPeptideNaturalIsotopeAverageSp ( ) const

virtual

Definition at line 85 of file peakionisotopematch.cpp.

{
  return _naturalIsotopeAverageSp;
}

References _naturalIsotopeAverageSp.

Referenced by pappso::QCPSpectrum::addMassDelta(), and pappso::findComplementIonType().

operator=()

PeakIonIsotopeMatch & pappso::PeakIonIsotopeMatch::operator=

(

const PeakIonIsotopeMatch &

other

)

Definition at line 92 of file peakionisotopematch.cpp.

{
  PeakIonMatch::operator=(other);
  _naturalIsotopeAverageSp = other._naturalIsotopeAverageSp;
 
  return *this;
}

References PeakIonIsotopeMatch(), _naturalIsotopeAverageSp, and pappso::PeakIonMatch::operator=().

toString()

QString pappso::PeakIonIsotopeMatch::toString ( ) const

virtual

Reimplemented from pappso::PeakIonMatch.

Definition at line 102 of file peakionisotopematch.cpp.

{
  return QString("%1isotope%2r%3mz%4")
    .arg(PeakIonMatch::toString())
    .arg(_naturalIsotopeAverageSp.get()->getIsotopeNumber())
    .arg(_naturalIsotopeAverageSp.get()->getIsotopeRank())
    .arg(getPeak().x);
}

References _naturalIsotopeAverageSp, pappso::PeakIonMatch::getPeak(), pappso::PeakIonMatch::toString(), and pappso::x.

Member Data Documentation

_naturalIsotopeAverageSp

PeptideNaturalIsotopeAverageSp pappso::PeakIonIsotopeMatch::_naturalIsotopeAverageSp

private

Definition at line 65 of file peakionisotopematch.h.

Referenced by PeakIonIsotopeMatch(), PeakIonIsotopeMatch(), PeakIonIsotopeMatch(), getPeptideNaturalIsotopeAverageSp(), operator=(), and toString().

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The documentation for this class was generated from the following files:

• pappsomspp/core/psm/peakionisotopematch.h
• pappsomspp/core/psm/peakionisotopematch.cpp