#include <pappsoexception.h>

Inheritance diagram for pappso::PappsoException:

Public Member Functions
	PappsoException (const QString &message) throw ()
	PappsoException (const PappsoException &other) throw ()
void	raise () const override
virtual QException *	clone () const override
virtual const QString &	qwhat () const throw ()
const char *	what () const noexcept override
virtual	~PappsoException () throw ()

Private Attributes
QString	m_message
std::string	m_stdMessage

Detailed Description

Definition at line 40 of file pappsoexception.h.

Constructor & Destructor Documentation

◆ PappsoException() [1/2]

pappso::PappsoException::PappsoException	(	const QString &	message	)
throw	(	)

inlineexplicit

Definition at line 43 of file pappsoexception.h.

    : m_message(QString("%1@%2: %3").arg(__FILE__, __FUNCTION__, message)),
      m_stdMessage(m_message.toStdString())
  {
  }

References m_message.

Referenced by PappsoException(), and clone().

◆ PappsoException() [2/2]

pappso::PappsoException::PappsoException	(	const PappsoException &	other	)
throw	(	)

inline

Definition at line 49 of file pappsoexception.h.

    : m_message(other.m_message), m_stdMessage(other.m_stdMessage)
  {
  }

References PappsoException().

◆ ~PappsoException()

virtual pappso::PappsoException::~PappsoException	(		)
throw	(	)

inlinevirtual

Definition at line 77 of file pappsoexception.h.

78 {

79 }

Member Function Documentation

◆ clone()

virtual QException * pappso::PappsoException::clone ( ) const

inlineoverridevirtual

Reimplemented in pappso::ExceptionInterrupted, pappso::ExceptionNotFound, pappso::ExceptionNotImplemented, pappso::ExceptionNotPossible, pappso::ExceptionNotRecognized, pappso::ExceptionOutOfRange, and pappso::XtandemError.

Definition at line 60 of file pappsoexception.h.

  {
    return new PappsoException(*this);
  }

References PappsoException().

◆ qwhat()

virtual const QString & pappso::PappsoException::qwhat	(		)	const
throw	(	)

inlinevirtual

Definition at line 66 of file pappsoexception.h.

  {
    return m_message;
  }

References m_message.

Referenced by pappso::cbor::psm::MzIdentMlReader::MzIdentMlReader(), pappso::PeptideFragmentIonListBase::PeptideFragmentIonListBase(), pappso::PeptideIsotopeSpectrumMatch::PeptideIsotopeSpectrumMatch(), pappso::cbor::psm::SageFileReader::SageFileReader(), pappso::XtandemHyperscore::XtandemHyperscore(), pappso::MsRunXicExtractorDiskBuffer::appendSliceInBuffer(), pappso::masschroq::MsRunPeptideList::collectPeptideMs2RetentionTime(), pappso::masschroq::MsRunPeptideList::collectPeptidePeakRetentionTime(), pappso::XtandemHyperscoreBis::computeXtandemHyperscore(), pappso::AaModification::createInstance(), pappso::TraceDetectionZivy::detect(), pappso::MzcborMsRunReader::fillMzcborSpectrum(), pappso::MsRunXicExtractorDiskBuffer::flushBufferOnDisk(), pappso::AaStringCodeMassMatching::getAaCodeFromMassWearingModification(), pappso::TimsDiaSlices::getCombinedMs2ScansByGlobalSliceIndex(), pappso::TimsDdaPrecursors::getCombinedMs2ScansByPrecursorId(), pappso::XtandemHyperscore::getHyperscore(), pappso::XtandemHyperscoreBis::getHyperscore(), pappso::AaModification::getInstance(), pappso::AaModification::getInstanceMutation(), pappso::MassSpectrumWidget::getJsonPsmIsotope(), pappso::AaCode::getMass(), pappso::Protein::getMass(), pappso::TimsData::getMassSpectrumCstSPtrByGlobalScanIndex(), pappso::TimsFrameType1::getMassSpectrumSPtr(), pappso::TimsDiaSlices::getMs1QualifiedSpectrumByGlobalSliceIndex(), pappso::TimsDiaSlices::getMs2QualifiedSpectrumByGlobalSliceIndex(), pappso::TimsData::getQualifiedMassSpectrumByGlobalScanIndex(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::MsRunReader::getRetentionTimeLine(), pappso::TimsFrameType1::getScanIntensityList(), pappso::TimsFrameType1::getScanTofIndexList(), pappso::MsRunReader::getTicChromatogram(), pappso::TimsBinDec::getTimsFrameSPtrByOffset(), pappso::TimsMsFileReader::initialize(), pappso::operator>>(), pappso::specpeptidoms::SemiGlobalAlignment::perfectShiftPossible(), pappso::specpeptidoms::SemiGlobalAlignment::perfectShiftPossibleEnd(), pappso::specpeptidoms::SemiGlobalAlignment::preciseAlign(), pappso::MsRunXicExtractorDisk::prepareExtractor(), pappso::TimsDirectXicExtractor::protectedExtractXicCoordSPtrList(), pappso::TimsMsRunReaderMs2::qualifiedMassSpectrum(), pappso::PwizMsRunReader::qualifiedMassSpectrumFromPwizSpectrumPtr(), pappso::masschroq::MsRunPeptideList::quantifyMatchBetweenRun(), pappso::TimsDdaPrecursors::rawReaderSpectrumCollectionByMsLevel(), pappso::masschroq::JsonInput::read_msrun_peptide_observations(), pappso::cbor::mzcbor::MzcborSpectrumCollectionReader::readSpectrum(), pappso::MzcborMsRunReader::readSpectrumCollectionWithMsrunReadConfig(), pappso::MsRunReader::scanNumber2SpectrumIndex(), pappso::TimsBinDec::startLinearRead(), pappso::MsRunXicExtractorDisk::unserializeSlice(), and pappso::specpeptidoms::SemiGlobalAlignment::updateAlignmentMatrix().

◆ raise()

void pappso::PappsoException::raise ( ) const

inlineoverride

Definition at line 55 of file pappsoexception.h.

  {
    throw *this;
  }

◆ what()

const char * pappso::PappsoException::what ( ) const

inlineoverridenoexcept

Definition at line 72 of file pappsoexception.h.

  {
    return m_stdMessage.c_str();
  }

References m_stdMessage.

Referenced by pappso::TimsDiaSlices::getCombinedMs2ScansByGlobalSliceIndex(), pappso::TimsDdaPrecursors::getCombinedMs2ScansByPrecursorId(), pappso::AaModification::getInstance(), pappso::AaModification::getInstanceMutation(), pappso::TimsDiaSlices::getMs1QualifiedSpectrumByGlobalSliceIndex(), pappso::TimsDiaSlices::getMs2QualifiedSpectrumByGlobalSliceIndex(), pappso::TimsDdaPrecursors::getQualifiedMs1MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getQualifiedMs2MassSpectrumBySpectrumDescr(), pappso::TimsDdaPrecursors::getSpectrumDescrListByFrameId(), pappso::TimsDdaPrecursors::getXicCoordTimsFromPrecursorId(), pappso::MzcborMsRunReader::massSpectrumSPtr(), pappso::MzcborMsRunReader::qualifiedMassSpectrum(), pappso::MzcborMsRunReader::readSpectrumCollection(), and pappso::MzcborMsRunReader::readSpectrumCollection2().

Member Data Documentation

◆ m_message

QString pappso::PappsoException::m_message

private

Definition at line 82 of file pappsoexception.h.

Referenced by PappsoException(), and qwhat().

◆ m_stdMessage

std::string pappso::PappsoException::m_stdMessage