pappso::MzxmlOutput::Translater Class Reference

Inheritance diagram for pappso::MzxmlOutput::Translater:

Public Member Functions
	Translater (MzxmlOutput *p_mzxml_output)
virtual	~Translater ()
virtual void	setQualifiedMassSpectrum (const QualifiedMassSpectrum &spectrum) override
virtual bool	needPeakList () const override
	tells if we need the peak list (if we want the binary data) for each spectrum
Public Member Functions inherited from pappso::SpectrumCollectionHandlerInterface
virtual bool	needMsLevelPeakList (unsigned int ms_level) const final
	tells if we need the peak list (if we want the binary data) for each spectrum, given an MS level
virtual void	setNeedMsLevelPeakList (unsigned int ms_level, bool want_peak_list) final
	tells if we need the peak list given
virtual bool	shouldStop ()
virtual void	loadingEnded ()
virtual void	spectrumListHasSize (std::size_t size)
virtual void	setReadAhead (bool is_read_ahead) final
	use threads to read a spectrum by batch of batch_size
virtual bool	isReadAhead () const
	tells if we want to read ahead spectrum

Private Attributes
MzxmlOutput *	mp_output

Detailed Description

Definition at line 76 of file mzxmloutput.h.

Constructor & Destructor Documentation

Translater()

MzxmlOutput::Translater::Translater

(

MzxmlOutput *

p_mzxml_output

)

Definition at line 52 of file mzxmloutput.cpp.

{
  mp_output = p_mzxml_output;
}

References pappso::MzxmlOutput::MzxmlOutput(), and mp_output.

~Translater()

MzxmlOutput::Translater::~Translater ( )

virtual

Definition at line 56 of file mzxmloutput.cpp.

{
}

Member Function Documentation

needPeakList()

bool MzxmlOutput::Translater::needPeakList ( ) const

overridevirtual

tells if we need the peak list (if we want the binary data) for each spectrum

Implements pappso::SpectrumCollectionHandlerInterface.

Definition at line 68 of file mzxmloutput.cpp.

{
  return true;
}

setQualifiedMassSpectrum()

void MzxmlOutput::Translater::setQualifiedMassSpectrum ( const QualifiedMassSpectrum & spectrum )

overridevirtual

Implements pappso::SpectrumCollectionHandlerInterface.

Definition at line 60 of file mzxmloutput.cpp.

{
  qDebug();
  mp_output->m_monitor.count();
  mp_output->writeQualifiedMassSpectrum(spectrum);
  qDebug();
}

References mp_output.

Member Data Documentation

mp_output

MzxmlOutput* pappso::MzxmlOutput::Translater::mp_output

private

Definition at line 86 of file mzxmloutput.h.

Referenced by Translater(), and setQualifiedMassSpectrum().

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The documentation for this class was generated from the following files:

• pappsomspp/core/msrun/output/mzxmloutput.h
• pappsomspp/core/msrun/output/mzxmloutput.cpp