org.openscience.jmol.app.Jmol

All Implemented Interfaces:: ImageObserver, MenuContainer, Serializable, Accessible, JsonNioClient, SplashInterface

public class Jmol extends JmolPanel

See Also:

Nested Class Summary

Nested classes/interfaces inherited from class org.openscience.jmol.app.jmolpanel.JmolPanel
JmolPanel.AboutAction, JmolPanel.ActionChangedListener, JmolPanel.AnimButton, JmolPanel.AppCloser, JmolPanel.AtomSetChooserAction, JmolPanel.CloseAction, JmolPanel.ConsoleAction, JmolPanel.CopyImageAction, JmolPanel.CopyScriptAction, JmolPanel.CreditsAction, JmolPanel.ExecuteScriptAction, JmolPanel.ExitAction, JmolPanel.ExportAction, JmolPanel.GaussianAction, JmolPanel.NewAction, JmolPanel.NewwinAction, JmolPanel.OpenAction, JmolPanel.OpenMolAction, JmolPanel.OpenPdbAction, JmolPanel.OpenUrlAction, JmolPanel.PasteClipboardAction, JmolPanel.PovrayAction, JmolPanel.PrintAction, JmolPanel.RecentFilesAction, JmolPanel.ResizeAction, JmolPanel.ScriptEditorAction, JmolPanel.ScriptWindowAction, JmolPanel.SurfaceToolAction, JmolPanel.ToWebAction, JmolPanel.TwoDEditorAction, JmolPanel.UguideAction, JmolPanel.ViewMeasurementTableAction, JmolPanel.WhatsNewAction, JmolPanel.WriteAction

Nested classes/interfaces inherited from class javax.swing.JPanel
JPanel.AccessibleJPanel

Nested classes/interfaces inherited from class javax.swing.JComponent
JComponent.AccessibleJComponent

Nested classes/interfaces inherited from class java.awt.Container
Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component
Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy

Nested classes/interfaces inherited from interface org.openscience.jmol.app.jsonkiosk.JsonNioClient
JsonNioClient.TouchHandler
Field Summary

Fields inherited from class org.openscience.jmol.app.jmolpanel.JmolPanel
aboutAction, allowJavaConsole, appletContext, atomSetChooser, atomsetchooserAction, bannerFrame, clientService, closeAction, commands, consoleAction, copyImageAction, copyImageActionProperty, copyScriptAction, copyScriptActionProperty, creditsAction, display, EDITOR_WINDOW_NAME, editorAction, executeScriptAction, exitAction, exportAction, exportActionProperty, FILE_OPEN_WINDOW_NAME, frame, gaussianAction, gaussianDialog, guimap, historyFile, imageType, isPlugin, javaConsoleframe, jmolApp, jmolJME, kioskFrame, measurementTable, menuItems, modelAdapter, myStatusListener, newAction, newwinAction, numWindows, openAction, openmolAction, openpdbAction, openurlAction, OUTSOCKET, pasteClipboardAction, pasteClipboardActionProperty, pcs, pluginFile, povrayAction, povrayActionProperty, preferencesDialog, printAction, printActionProperty, qualityJPG, qualityPNG, recentFiles, recentFilesAction, resizeAction, screenSize, SCRIPT_WINDOW_NAME, splash, startupHeight, startupWidth, status, surfaceTool, SURFACETOOL_WINDOW_NAME, surfaceToolAction, surfaceToolActionProperty, toolbar, toWebAction, toWebActionProperty, twoDEditorAction, twoDEditorActionProperty, uguideAction, viewMeasurementTableAction, vwr, vwrOptions, WEB_MAKER_WINDOW_NAME, whatsnewAction, windowName, writeAction, writeActionProperty

Fields inherited from class javax.swing.JComponent
listenerList, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW

Fields inherited from class java.awt.Component
accessibleContext, BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Fields inherited from interface org.openscience.jmol.app.jsonkiosk.JsonNioClient
TYPES
Constructor Summary

Constructors

Constructor

Description

Jmol(JmolApp jmolApp, Splash splash, JFrame frame, Jmol parent, int startupWidth, int startupHeight, Map<String,Object> vwrOptions, Point loc)
Method Summary

Modifier and Type

Method

Description

static Jmol

getJmol(JFrame baseframe, int width, int height, Map<String,Object> vwrOptions)

static Jmol

getJmol(JmolApp jmolApp, JFrame frame)

static void

main(String[] args)

protected static void

startJmol(JmolApp jmolApp)

Methods inherited from class org.openscience.jmol.app.jmolpanel.JmolPanel
addHelpMenuBar, addJmolProperties, addJmolProperty, addJmolWindowInfo, addJmolWindowInnerInfo, addMacrosMenu, addNormalMenuBar, addPluginMenu, createDisplayAndAddStatusListener, createGuiMap, createMenu, createMenubar, createMenuItem, createStatusBar, createToolBar, createToolbarButton, doClose, getAction, getAndRegisterPlugin, getConsole, getDialogs, getFrameActions, getIconX, getInstanceWithParams, getJavaConsole, getJavaConsole, getJmolProperty, getJsonNioServer, getMeasurementTable, getMenuItem, getPluginOption, getPreference, getStringX, getUserDirectory, getWindowName, isServer, launchMainFrame, newToolbar, nioClosed, notifyFileOpen, notifyGaussian, notifyGeneralCallback, notifyLanguage, notifyMeasure, notifyMenu, notifyNBO, notifyNBO, notifyPreferences, notifyServer, print, processNioMessage, report, resizeInnerPanel, saveWindowSizes, say, sendNioSyncRequest, serverCycle, setAtomChooser, setCommandHooks, setFrameLocation, setIntoFrame, setMenuKeys, setMenuState, setPluginOption, setStatus, setupConsole, setupDisplay, setupDnD, setupModelAdapterAndViewer, showStatus, updateConsoleFont

Methods inherited from class javax.swing.JPanel
getAccessibleContext, getUI, getUIClassID, paramString, setUI, updateUI

Methods inherited from class javax.swing.JComponent
addAncestorListener, addNotify, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBaseline, getBaselineResizeBehavior, getBorder, getBounds, getClientProperty, getComponentGraphics, getComponentPopupMenu, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getFontMetrics, getGraphics, getHeight, getInheritsPopupMenu, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPopupLocation, getPreferredSize, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, hide, isDoubleBuffered, isLightweightComponent, isManagingFocus, isOpaque, isOptimizedDrawingEnabled, isPaintingForPrint, isPaintingOrigin, isPaintingTile, isRequestFocusEnabled, isValidateRoot, paint, paintBorder, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setComponentPopupMenu, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFocusTraversalKeys, setFont, setForeground, setInheritsPopupMenu, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update

Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, getMousePosition, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setLayout, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocusInWindow, resize, resize, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setMixingCutoutShape, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details
- Jmol
  
  public Jmol(JmolApp jmolApp, Splash splash, JFrame frame, Jmol parent, int startupWidth, int startupHeight, Map<String,Object> vwrOptions, Point loc)
Method Details
- main
  
  public static void main(String[] args)
- startJmol
  
  protected static void startJmol(JmolApp jmolApp)
- getJmol
  
  public static Jmol getJmol(JFrame baseframe, int width, int height, Map<String,Object> vwrOptions)
- getJmol
  
  public static Jmol getJmol(JmolApp jmolApp, JFrame frame)

Class Jmol

Nested Class Summary

Nested classes/interfaces inherited from class org.openscience.jmol.app.jmolpanel.JmolPanel

Nested classes/interfaces inherited from class javax.swing.JPanel

Nested classes/interfaces inherited from class javax.swing.JComponent

Nested classes/interfaces inherited from class java.awt.Container

Nested classes/interfaces inherited from class java.awt.Component

Nested classes/interfaces inherited from interface org.openscience.jmol.app.jsonkiosk.JsonNioClient

Field Summary

Fields inherited from class org.openscience.jmol.app.jmolpanel.JmolPanel

Fields inherited from class javax.swing.JComponent

Fields inherited from class java.awt.Component

Fields inherited from interface java.awt.image.ImageObserver

Fields inherited from interface org.openscience.jmol.app.jsonkiosk.JsonNioClient

Constructor Summary

Method Summary

Methods inherited from class org.openscience.jmol.app.jmolpanel.JmolPanel

Methods inherited from class javax.swing.JPanel

Methods inherited from class javax.swing.JComponent

Methods inherited from class java.awt.Container

Methods inherited from class java.awt.Component

Methods inherited from class java.lang.Object

Constructor Details

Jmol

Method Details

main

startJmol

getJmol

getJmol