Package org.jmol.shapesurface
Class MolecularOrbital
java.lang.Object
org.jmol.shape.Shape
org.jmol.shape.MeshCollection
org.jmol.shapesurface.Isosurface
org.jmol.shapesurface.MolecularOrbital
- All Implemented Interfaces:
MeshDataServer,VertexDataServer
- Direct Known Subclasses:
NBO
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Field Summary
Fields inherited from class org.jmol.shapesurface.Isosurface
iHaveBitSets, isomeshes, keyXy, sg, thisMeshFields inherited from class org.jmol.shape.MeshCollection
bsDisplay, colix, color, connections, currentMesh, displayWithinDistance2, displayWithinPoints, explicitID, htObjects, isDisplayWithinNot, isFixed, jvxlData, linkedMesh, meshCount, meshes, modelIndex, nUnnamed, pickedMesh, pickedModel, pickedPt, pickedVertex, PREVIOUS_MESH_ID, previousMeshID, titleFields inherited from class org.jmol.shape.Shape
bsColixSet, bsSizeSet, isBioShape, ms, myType, RADIUS_MAX, shapeID, translucentAllowed, translucentLevel, vf, vwr -
Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionprotected voidclearSg()getMoInfo(int modelIndex) getProperty(String propertyName, int index) voidvoidmerge(MeshCollection shape) called by ParallelProcessor at completionvoidsetProperty(String propertyName, Object value, BS bs) Methods inherited from class org.jmol.shapesurface.Isosurface
addMeshInfo, addRequiredFile, addTriangleCheck, addVertexCopy, allocMesh, calculateGeodesicSurface, checkObjectClicked, checkObjectHovered, discardTempData, fillMeshData, getCapSlabInfo, getCmd, getPlane, getPolygonColorData, getPropertyData, getPropI, getShapeDetail, getSurfacePointIndexAndFraction, getValue, getValues, getVertices, invalidateTriangles, newSg, notifySurfaceGenerationCompleted, notifySurfaceMappingCompleted, setOutputChannel, setPropI, setRequiredFile, setScriptInfo, slabPolygonsMethods inherited from class org.jmol.shape.MeshCollection
checkExplicit, clean, deleteMeshI, deleteMeshKey, getIndexFromName, getMesh, getMeshList, getPickedPoint, getPropDataMC, getPropMC, resetObjects, setMeshColor, setModelVisibilityFlags, setPropMC, setStatusPicked, setTitle, setTokenPropertyMethods inherited from class org.jmol.shape.Shape
appendCmd, checkBoundsMinMax, checkObjectDragged, coordinateInRange, encodeColor, findNearestAtomIndex, getColix, getColixA, getColixB, getColixI, getColorCommand, getColorCommandUnk, getFontCommand, getPropShape, getSize, getSizeG, getTranslucentLabel, initializeShape, initModelSet, replaceGroup, setAtomClickability, setModelSet, setProperties, setPropS, setShapeSizeRD, setSize, setSizeRD, wasClicked
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Constructor Details
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MolecularOrbital
public MolecularOrbital()
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Method Details
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initShape
public void initShape()- Overrides:
initShapein classIsosurface
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setProperty
- Overrides:
setPropertyin classIsosurface
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getProperty
- Overrides:
getPropertyin classIsosurface- Parameters:
propertyName-index-- Returns:
- true if serviced
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getMoInfo
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clearSg
protected void clearSg()- Overrides:
clearSgin classIsosurface
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getShapeState
- Overrides:
getShapeStatein classIsosurface
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merge
Description copied from class:MeshCollectioncalled by ParallelProcessor at completion- Overrides:
mergein classMeshCollection- Parameters:
shape-
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