org.jmol.adapter.writers.CDXMLWriter

public class CDXMLWriter extends CMLWriter

Minimal ChemDraw CDXML writer just converts CDX to CDXML involving just the basic necessities for XmlCDXReader.

Field Summary

Fields inherited from class org.jmol.adapter.writers.CMLWriter
addBonds, allTrajectories, atomsMax, doTransform, oc, vwr
Constructor Summary

Constructors

Constructor

Description

CDXMLWriter()
Method Summary

Modifier and Type

Method

Description

static String

fromASC(AtomSetCollection asc)

static String

fromCDX(GenericBinaryDocumentReader binaryDoc)

static String

fromString(Viewer vwr, String type, String mol)

static void

main(String[] args)

void

set(Viewer viewer, OC out, Object[] data)

static String

wrapCData(String s)

wrap the string as character data, with replacements for [ noted as a list starting with * after the CDATA termination

String

write(BS bs)

Methods inherited from class org.jmol.adapter.writers.CMLWriter
addAttribute, addAttributes, appendEmptyTag, closeTag, openDocument, openTag, startOpenTag, terminateEmptyTag, terminateTag, toString

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Class CDXMLWriter

Field Summary